Uthe, J.J., Royaee, A., Lunney, J.K., Stabel, T.J., Zhao, S.-H., Tuggle, C.K. , Bearson, S.M.D. 2007. The host-specific porcine response to Salmonella enterica serovars Choleraesuis and Typhimurium. (accepted, Molecular Immunology).

C.K. Tuggle, Y.F. Wang and O. Couture. 2007. INVITED REVIEW: Advances in Swine Transcriptomics. (accepted, International Journal of Biological Sciences).

Tuggle, C.K., Dekkers. J., J. Reecy. 2006. Integration of Structural and Functional Genomics. Animal Genetics 37 (Supp. 1): 1-6.

Zhao. S.H., D. Kuhar, J. K. Lunney, H. Dawson, C. Guidry, J.J. Uthe, S. M. D. Bearson, J. Recknor, D. Nettleton, C.K. Tuggle. 2006. Gene expression profiling in Salmonella Choleraesuis infected porcine lung using a long oligonucleotide microarray. Mammalian Genome 17:777-89.

Uthe, J.J., Stabel, T.J., Bearson, S.M.D., S.-H. Zhao, S.-H., Tuggle, C.K.. 2006. Analysis of Porcine Differential Gene Expression Following Challenge with Salmonella enterica Serotype Choleraesuis using Suppression Subtractive Hybridization. Vet. Micro. 114:60-71.

Zhao, S.-H. J. Recknor, J.K. Lunney, D. Nettleton, D. Kuhar, S. Orley, H. Dawson, C.K. Tuggle. 2005. Validating a first-generation porcine oligonucleotide microarray for transcriptional profiling in the pig. Genomics 86:618-625.

Abbott, M.A., and Tuggle, C.K.. 2005. Ectopic HOXA5 expression results in abnormal differentiation, migration and p53-independent cell death of superficial dorsal horn neurons. Brain Res. Dev. Brain Res. 159:87-97.

Demeure, O., Pomp, D., Rothschild, M.F., Milan, D., Tuggle, C.K.. 2005. Large-scale EST mapping refines the comparative maps for SSC1 and SSC7 with the human genome. Animal Genetics 36:381-389.

Kim, J.W., S.-H. Zhao, J.J. Uthe, S.M.D. Bearson, C.K. Tuggle. 2005. Physical mapping of eight pig genes whose expression level is acutely affected by Salmonella challenge. Animal Genetics, 36: 359-362.

Caetano, A.R., Edeal, J.B., Burns, K., Johnson, R.K., Tuggle, C.K.. Pomp D. 2005. Physical Mapping of Genes in the Porcine Ovarian Transcriptome. Animal Genetics 36:322-330.

Joksimovic, M., Jeannotte, L., Tuggle, C.K.. 2005. Dynamic expression of murine HOXA5 protein in the central nervous system. Mechanisms of Development-Gene Expression Patterns 5: 792-800.

Tabariès, S., Lapointe, J., Besch, T., Carter, M., Woollard, J., Tuggle, C.K., and Jeannotte, L. 2005. Cdx Protein Interaction to Hoxa5 Regulatory Sequences Contributes to Hoxa5 Regional Expression along the Axial Skeleton. 2005. Molecular and Cellular Biology 25:1389-1401.

Lee, S.-H., Zhao, S.-H., Recknor, J., Nettleton, D., Orley, S., Kang S.-K., Lee B.-C., Hwang W.-S., Tuggle C.K. 2005. Transcriptional profiling using a novel cDNA array identifies differential gene expression during porcine embryo elongation. Mol. Reprod. Dev. 71:129-139.

Krieger, K.E., M.A. Abbott, M. Joksimovic, P.A. Lueth, I.M. Sonea, L. Jeannotte, and C.K. Tuggle. 2004. Transgenic mice ectopically expressing HOXA5 in the dorsal spinal cord (SC) show structural defects of the cervical SC along with sensory and motor defects of the forelimb. Brain Res. Develop. Brain Res. 150:125-139.

Moller, M., F. Berg, J. Riquet, D. Pomp, A. Archibald, S. Anderson, K. Feve, Y. Zhang, M.F. Rothschild, D. Milan, L. Andersson and C.K. Tuggle. 2004. High-resolution comparative mapping across pig chromosome 4 (SSC4), emphasizing the FAT1 region. Mammalian Genome 15: 717-31.

Zhao, S.-H., D. G. Simmons, J.C. Cross, T.E. Scheetz, T.L. Casavant, M. B. Soares, and C.K. Tuggle. 2004. PLET1, a highly expressed and processed novel gene in pig and mouse placenta is transcribed but poorly spliced in human. Genomics 84;114-125.

C.K. Tuggle, J.A. Green, C. Fitzsimmons, R. Woods, R.S. Prather, S. Malchenko, M.B. Soares, T. Kucaba, K. Crouch, C. Smith, D. Tack, N. Robinson, B. O’Leary, T. Scheetz, T. Casavant, D. Pomp. J.B. Edeal, Y. Zhang, M.F. Rothschild, K. Garwood, and W. Beavis. 2003. EST-based gene discovery in pig: virtual expression patterns and comparative mapping to human. Mamm. Gen. 14:565-579.

Sun, H.S., L. L. Anderson, T.-P. Yu, K.S. Kim, J. Klindt, and C.K. Tuggle. 2002. Neonatal Meishan pigs show POU1F1 genotype effects on plasma GH and PRL concentration. Anim. Reprod. Sci. 69:223-237.

Yu, T.-P., Sun, H. S., Wahls, S., I. Sanchez-Serrano, M. F. Rothschild, and C.K. Tuggle. 2001. Cloning of the full length pig PIT1 (POU1F1) cDNA and a novel alternative PIT1 transcript, and functional studies of their encoded proteins. Anim. Biotech. 12(1):1-19.

Nowling, T., W. Zhou, K.E. Krieger, C. Larochelle, M. C. Nguyen-Huu, L. Jeannotte, and C.K. Tuggle. 1999. Hoxa5 gene regulation: a gradient of binding to a brachial spinal cord element. Developmental Biology 208:134-146.